Collaborations

Software and data tools connected to the lab’s work, and the institutions we collaborate with.

Tool/Software Development

Tools and platforms the lab develops, contributes to, or relies on day to day. Each link goes to the maintainers.

Sequence and metadata retrieval across viral taxa.

Variant tracking and standardized epidemiological data.

Reagents, reference strains and services.

Bayesian phylogenetic and phylodynamic inference. Note that BEAST and BEAST2 are developed in parallel and have different features.

Modeling support across the CEIRR network.

Real-time discussion of pathogen genomic data and analysis.

Institutions we work with on surveillance, sequencing and analysis.

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Icahn School of Medicine at Mount Sinai — Center for Research on Influenza Pathogenesis and Transmission (CRIPT) (opens in a new tab)
United States
NIAID Center of Excellence for Influenza Research and Response partner.
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Institution, location and a short note on the work.
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Institution, location and a short note on the work.
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Institution, location and a short note on the work.
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Institution, location and a short note on the work.
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Collaborator to be added
Institution, location and a short note on the work.